STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTOP00000025535HTH La-type RNA-binding domain-containing protein. (233 aa)    
Predicted Functional Partners:
ENSSTOP00000024156
Uncharacterized protein.
 
      0.900
Dhx15
Uncharacterized protein.
   
 
 0.503
ENSSTOP00000028641
Uncharacterized protein.
   
 
 0.503
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
 
 0.498
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 
 0.498
PAIP1
Poly(A) binding protein interacting protein 1.
   
 
 0.498
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
 
 0.498
Dkc1
PUA domain-containing protein.
   
 
 0.485
I3MI67_ICTTR
PUA domain-containing protein.
   
 
 0.485
I3MXT5_ICTTR
PUA domain-containing protein.
   
 
 0.485
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.