STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTOP00000025537Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
ENSSTOP00000026599
CA domain-containing protein.
 
     0.927
I3MAI8_ICTTR
Uncharacterized protein.
 
     0.925
CTNNB1
Catenin beta 1.
    
 0.761
JUP
Junction plakoglobin.
    
 0.715
ARVCF
ARVCF delta catenin family member.
    
 0.689
CTNND1
Catenin delta 1.
    
 0.689
PKP4
Plakophilin 4.
    
 0.643
CTNND2
Catenin delta 2.
    
 0.643
CTNNA1
Catenin alpha 1.
    
 0.585
I3MZY4_ICTTR
Uncharacterized protein.
    
 0.585
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.