STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKN1Protein kinase N1. (947 aa)    
Predicted Functional Partners:
PDPK1
3-phosphoinositide dependent protein kinase 1.
    
0.966
Rhoa
Ras homolog family member A.
    
 0.958
LOC101959358
Uncharacterized protein.
    
 0.958
Rhoc
Uncharacterized protein.
    
 0.932
ENSSTOP00000031001
Uncharacterized protein.
    
 0.932
I3MKE3_ICTTR
Uncharacterized protein.
    
 0.908
Rhob
Uncharacterized protein.
    
 0.885
LOC101956215
Uncharacterized protein.
    
 0.885
PKN2
Protein kinase N2.
  
 
 
0.859
Ywhae
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 0.850
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.