STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM33Tripartite motif containing 33. (1028 aa)    
Predicted Functional Partners:
SMAD3
Mothers against decapentaplegic homolog.
    
 0.974
SMAD2
Mothers against decapentaplegic homolog.
    
 0.967
SMAD4
Mothers against decapentaplegic homolog.
   
 0.967
CDC20
Cell division cycle 20.
   
 
 0.945
CDC27
Cell division cycle 27.
   
   0.943
ANAPC1
Anaphase promoting complex subunit 1.
   
   0.942
CDC23
Cell division cycle 23.
    
   0.941
CCNA2
Cyclin A2; Belongs to the cyclin family.
   
   0.941
Bub1b
Uncharacterized protein.
    
   0.941
ANAPC5
Anaphase promoting complex subunit 5.
    
   0.941
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.