STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX20T-box transcription factor 20. (446 aa)    
Predicted Functional Partners:
GSC
Goosecoid homeobox.
    
 
 0.928
PHF13
PHD finger protein 13.
    
   0.770
SLC25A21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.770
NKX2-5
NK2 homeobox 5.
   
 
 0.744
Gata4
GATA-type domain-containing protein.
   
 
 0.705
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.678
TLE3
TLE family member 3, transcriptional corepressor.
    
 
 0.651
TLE2
TLE family member 2, transcriptional corepressor.
    
 
 0.651
TLE5
TLE family member 5, transcriptional modulator.
    
 
 0.651
TLE4
TLE family member 4, transcriptional corepressor.
    
 
 0.651
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.