STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC11A1Solute carrier family 11 member 1. (548 aa)    
Predicted Functional Partners:
SLC11A2
Solute carrier family 11 member 2.
  
  
0.851
S100A12
Protein S100; Belongs to the S-100 family.
   
 
 0.803
C5AR1
Complement C5a receptor 1; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.706
I3MMP4_ICTTR
NUC domain-containing protein.
   
 0.624
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
  0.613
CYBB
Cytochrome b-245 beta chain.
   
  
 0.609
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.603
IL1RN
Interleukin-1.
   
  
 0.584
SLC30A9
Solute carrier family 30 member 9.
   
 
 0.569
TYROBP
TYRO protein tyrosine kinase binding protein.
   
    0.567
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.