STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD109CD109 molecule. (1235 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.812
CFP
Complement factor properdin.
    
 0.750
LOC101966045
Uncharacterized protein.
  
 0.749
CBX2
Chromobox 2.
    
 0.724
C9
Complement C9.
   
 0.723
CBX4
Chromobox 4.
    
 0.716
Cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.698
C8B
Complement C8 beta chain.
   
 0.695
LOC101955676
RING-type domain-containing protein.
    
 0.684
PCGF2
Polycomb group ring finger 2.
    
 0.684
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.