STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CbsCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (555 aa)    
Predicted Functional Partners:
CTH
Cystathionine gamma-lyase.
 0.999
CARS2
Cysteinyl-tRNA synthetase 2, mitochondrial.
  
 0.989
CRYM
Crystallin mu.
  
 
 0.962
TSTD1
Thiosulfate sulfurtransferase like domain containing 1.
  
 
 0.952
PSAT1
Phosphoserine aminotransferase.
  
 
 0.950
PHGDH
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.949
GCLC
Glutamate-cysteine ligase catalytic subunit.
   
 0.944
MTHFR
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
    
 0.944
MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
 
 
 0.941
PSPH
Phosphoserine phosphatase.
    
 0.941
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.