STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTOP00000027088Uncharacterized protein. (1274 aa)    
Predicted Functional Partners:
VCL
Vinculin.
    
0.913
CTNNB1
Catenin beta 1.
   
 0.898
JUP
Junction plakoglobin.
   
 0.880
ARVCF
ARVCF delta catenin family member.
   
 0.802
CTNND1
Catenin delta 1.
   
 0.802
TLN1
Talin 1.
    
 0.791
TLNRD1
Talin rod domain containing 1.
    
 0.791
TLN2
Talin 2.
    
 0.791
AFDN
Afadin, adherens junction formation factor.
    
 0.779
PKP4
Plakophilin 4.
   
 0.774
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.