STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTOP00000027176Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
RND2
Rho family GTPase 2.
    
  0.606
RND3
Rho family GTPase 3.
    
  0.586
RND1
Rho family GTPase 1.
    
  0.568
RAC1
Rac family small GTPase 1.
    
 0.528
RAB14
RAB14, member RAS oncogene family.
   
 0.498
RAC3
Rac family small GTPase 3.
    
 0.495
RAC2
Rac family small GTPase 2.
    
 0.495
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
     
 0.478
RAB9B
RAB9B, member RAS oncogene family.
    
  0.466
RAB9A
RAB9A, member RAS oncogene family.
    
  0.466
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.