STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTOP00000027779Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
I3NFF5_ICTTR
C2H2-type domain-containing protein.
 
      0.900
PARG
Poly(ADP-ribose) glycohydrolase.
   
    0.674
BARD1
BRCA1 associated RING domain 1.
   
 0.510
MRPS16
Mitochondrial ribosomal protein S16.
   
 0.505
I3MHF1_ICTTR
Uncharacterized protein.
    
  0.501
KDM6A
Lysine demethylase 6A.
   
 0.490
YTHDC2
YTH domain containing 2.
   
  0.481
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.464
Fbxl17
Uncharacterized protein.
    
 
 0.462
ARID4B
AT-rich interaction domain 4B.
   
 0.458
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.