STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL6Oxysterol-binding protein; Belongs to the OSBP family. (967 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
    
 0.796
VAPA
VAMP associated protein A.
    
 0.796
MOSPD1
Motile sperm domain containing 1.
    
 0.674
MOSPD3
Motile sperm domain containing 3.
    
 0.674
LOC101974228
MSP domain-containing protein.
    
 0.674
TNRC18
Trinucleotide repeat containing 18.
    
 0.646
GAK
Cyclin G associated kinase.
   
 
 0.610
NFE2L2
Nuclear factor, erythroid 2 like 2.
      
 0.609
NFE2L3
Nuclear factor, erythroid 2 like 3.
      
 0.609
DNPEP
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
      
 0.604
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.