STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROPN1LRhophilin associated tail protein 1 like. (219 aa)    
Predicted Functional Partners:
MEIG1
Meiosis/spermiogenesis associated 1.
   
  
 0.652
SCRG1
Stimulator of chondrogenesis 1.
      
 0.619
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
      
 0.587
MARCHF6
Membrane associated ring-CH-type finger 6.
 
    
 0.529
NME5
NME/NM23 family member 5; Belongs to the NDK family.
   
  
 0.440
TTC29
Tetratricopeptide repeat domain 29.
   
  
 0.434
FAM71D
Family with sequence similarity 71 member D.
   
  
 0.429
TEKT3
Tektin 3.
   
  
 0.417
CFAP36
Cilia and flagella associated protein 36.
      
 0.414
MNS1
Meiosis specific nuclear structural 1.
      
 0.410
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.