STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTOP00000029044Bromo domain-containing protein. (283 aa)    
Predicted Functional Partners:
Taf7l
TAFII55_N domain-containing protein.
    
 
 0.723
TAF7
TATA-box binding protein associated factor 7.
    
 
 0.723
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 
 0.698
Taf1
Transcription initiation factor TFIID subunit.
    
 
0.660
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
    
 
 0.659
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
    
 
 0.659
CSNK2A2
Casein kinase 2 alpha 2; Belongs to the protein kinase superfamily.
    
 
 0.573
Csnk2a1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.573
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.518
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
    
 
 0.515
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.