STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID3BAT-rich interaction domain 3B. (564 aa)    
Predicted Functional Partners:
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.697
SAP30
Sin3A associated protein 30.
    
 0.691
SAP30L
SAP30 like.
    
 0.691
PBRM1
Polybromo 1.
   
 
 0.684
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
    
 0.648
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.648
BRMS1L
BRMS1 like transcriptional repressor.
    
 0.648
RBL2
RB transcriptional corepressor like 2.
    
 
 0.643
ACTL6A
Actin like 6A; Belongs to the actin family.
    
 
 0.636
ACTL6B
Actin like 6B; Belongs to the actin family.
    
 
 0.636
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.