STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD300LGCD300 molecule like family member g. (362 aa)    
Predicted Functional Partners:
C1orf109
Chromosome 1 open reading frame 109.
   
    0.795
FREM1
FRAS1 related extracellular matrix 1.
   
 
 0.791
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.788
ACOT12
Acyl-CoA thioesterase 12.
   
    0.785
ACOT11
Acyl-CoA thioesterase 11.
   
    0.785
LOC101957089
Uncharacterized protein.
   
    0.785
Slco1a2
MFS domain-containing protein.
   
    0.784
LIX1
Limb and CNS expressed 1.
   
    0.784
TNN
Tenascin N.
    
 0.783
TNC
Tenascin C.
    
 0.783
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.