STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N6AMT1N-6 adenine-specific DNA methyltransferase 1. (214 aa)    
Predicted Functional Partners:
TRMT112
tRNA methyltransferase subunit 11-2.
    
 0.999
ETF1
Eukaryotic translation termination factor 1.
   
 0.946
MTRF1
Mitochondrial translation release factor 1.
  
 
 0.944
MTRF1L
Mitochondrial translational release factor 1 like.
  
 
 0.932
NAMPT
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
  
 
 0.924
FBXO5
F-box protein 5.
  
 
 0.924
C12orf65
Chromosome 12 open reading frame 65.
  
 
 0.924
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.902
CPOX
Coproporphyrinogen oxidase.
  
 
 0.902
GSPT2
G1 to S phase transition 2.
    
 0.850
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.