STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL15F-box and leucine rich repeat protein 15. (310 aa)    
Predicted Functional Partners:
LOC101967492
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.972
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.972
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.954
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.849
CRY2
Cryptochrome circadian regulator 2.
    
 0.828
CRY1
Cryptochrome circadian regulator 1.
    
 0.828
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.805
COMMD4
COMM domain containing 4.
    
 0.742
Rbx1
RING-type domain-containing protein.
    
 0.717
I3N110_ICTTR
RING-type domain-containing protein.
    
 0.717
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.