STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADGRB3Adhesion G protein-coupled receptor B3; Belongs to the G-protein coupled receptor 2 family. (1522 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 0.989
RANGAP1
Ran GTPase activating protein 1.
   
 0.931
KPNB1
Karyopherin subunit beta 1.
   
 0.923
XPOT
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
    
 0.916
NUP153
Nucleoporin 153.
    
 0.896
NUP50
Nucleoporin 50.
   
  0.818
RANGRF
RAN guanine nucleotide release factor.
    
 
 0.807
CSE1L
Chromosome segregation 1 like.
   
 
 0.805
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.803
I3NCA9_ICTTR
RanBD1 domain-containing protein.
   
 0.803
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.