STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCMH1Scm polycomb group protein homolog 1. (665 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.913
LOC101955676
RING-type domain-containing protein.
    
 0.904
PCGF2
Polycomb group ring finger 2.
    
 0.900
Rnf2
RING-type domain-containing protein.
    
 0.849
ENSSTOP00000028844
Uncharacterized protein.
    
 0.849
RING1
Ring finger protein 1.
    
 0.832
CBX4
Chromobox 4.
    
 0.830
CBX2
Chromobox 2.
    
 0.818
EED
Embryonic ectoderm development.
   
 0.817
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.791
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.