ENSSTOP00000031124 protein (Ictidomys tridecemlineatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSTOP00000031124

Uncharacterized protein. (296 aa)

Predicted Functional Partners:

NADSYN1

0.899

NMNAT2

0.887

H6PD

0.884

MALSU1

0.881

NADK2

0.878

Rnaseh1

0.869

NMNAT1

0.866

NMNAT3

0.866

NDUFAF6

0.858

NUDT12

0.857

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTOP00000031124	H6PD	ENSSTOP00000031124	ENSSTOP00000029097	Uncharacterized protein.	Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.	0.884
ENSSTOP00000031124	MALSU1	ENSSTOP00000031124	ENSSTOP00000016594	Uncharacterized protein.	Mitochondrial assembly of ribosomal large subunit 1.	0.881
ENSSTOP00000031124	NADK2	ENSSTOP00000031124	ENSSTOP00000002462	Uncharacterized protein.	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	0.878
ENSSTOP00000031124	NADSYN1	ENSSTOP00000031124	ENSSTOP00000001367	Uncharacterized protein.	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	0.899
ENSSTOP00000031124	NDUFAF6	ENSSTOP00000031124	ENSSTOP00000016641	Uncharacterized protein.	NADH:ubiquinone oxidoreductase complex assembly factor 6.	0.858
ENSSTOP00000031124	NMNAT1	ENSSTOP00000031124	ENSSTOP00000000949	Uncharacterized protein.	Nicotinamide-nucleotide adenylyltransferase.	0.866
ENSSTOP00000031124	NMNAT2	ENSSTOP00000031124	ENSSTOP00000008093	Uncharacterized protein.	Nicotinamide nucleotide adenylyltransferase 2.	0.887
ENSSTOP00000031124	NMNAT3	ENSSTOP00000031124	ENSSTOP00000029573	Uncharacterized protein.	Nicotinamide-nucleotide adenylyltransferase.	0.866
ENSSTOP00000031124	NUDT12	ENSSTOP00000031124	ENSSTOP00000025435	Uncharacterized protein.	Nudix hydrolase 12.	0.857
ENSSTOP00000031124	Rnaseh1	ENSSTOP00000031124	ENSSTOP00000011448	Uncharacterized protein.	Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.869
H6PD	ENSSTOP00000031124	ENSSTOP00000029097	ENSSTOP00000031124	Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.	Uncharacterized protein.	0.884
H6PD	NDUFAF6	ENSSTOP00000029097	ENSSTOP00000016641	Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.	NADH:ubiquinone oxidoreductase complex assembly factor 6.	0.568
MALSU1	ENSSTOP00000031124	ENSSTOP00000016594	ENSSTOP00000031124	Mitochondrial assembly of ribosomal large subunit 1.	Uncharacterized protein.	0.881
MALSU1	NADSYN1	ENSSTOP00000016594	ENSSTOP00000001367	Mitochondrial assembly of ribosomal large subunit 1.	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	0.854
MALSU1	NMNAT1	ENSSTOP00000016594	ENSSTOP00000000949	Mitochondrial assembly of ribosomal large subunit 1.	Nicotinamide-nucleotide adenylyltransferase.	0.855
MALSU1	NMNAT2	ENSSTOP00000016594	ENSSTOP00000008093	Mitochondrial assembly of ribosomal large subunit 1.	Nicotinamide nucleotide adenylyltransferase 2.	0.855
MALSU1	NMNAT3	ENSSTOP00000016594	ENSSTOP00000029573	Mitochondrial assembly of ribosomal large subunit 1.	Nicotinamide-nucleotide adenylyltransferase.	0.855
MALSU1	NUDT12	ENSSTOP00000016594	ENSSTOP00000025435	Mitochondrial assembly of ribosomal large subunit 1.	Nudix hydrolase 12.	0.795
NADK2	ENSSTOP00000031124	ENSSTOP00000002462	ENSSTOP00000031124	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	Uncharacterized protein.	0.878
NADK2	NADSYN1	ENSSTOP00000002462	ENSSTOP00000001367	NAD kinase 2, mitochondrial; Mitochondrial NAD(+) kinase that phosphorylates NAD(+) to yield NADP(+). Can use both ATP or inorganic polyphosphate as the phosphoryl donor.	Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.	0.911