STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEXNNexilin F-actin binding protein. (667 aa)    
Predicted Functional Partners:
MIGA2
Mitoguardin 2.
 
  
  0.763
MIGA1
Mitoguardin 1.
 
      0.695
SURF6
Surfeit 6.
     
 0.621
Ppp1r9a
Uncharacterized protein.
    
 
 0.617
Ppp1r9b
PDZ domain-containing protein.
    
 
 0.596
DPM3
Dolichol-phosphate mannosyltransferase subunit 3; Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER. Belongs to the DPM3 family.
     
 0.527
DOLK
Dolichol kinase.
     
 0.526
HCLS1
Hematopoietic cell-specific Lyn substrate 1.
    
 
 0.472
CTTN
Cortactin.
    
 
 0.466
DBN1
Drebrin 1.
    
 
 0.464
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.