STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMOTAngiomotin. (1068 aa)    
Predicted Functional Partners:
NF2
Neurofibromin 2.
    
 0.990
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
    
 0.986
PATJ
PATJ crumbs cell polarity complex component.
    
 0.970
AMOTL1
Angiomotin like 1.
    
0.959
ARHGAP17
Rho GTPase activating protein 17.
    
 0.956
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 0.954
YAP1
Yes associated protein 1.
    
 0.951
WWTR1
WW domain containing transcription regulator 1.
    
 0.951
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.949
SFN
Stratifin; Belongs to the 14-3-3 family.
    
 0.945
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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