STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CgasMab-21 domain-containing protein. (305 aa)    
Predicted Functional Partners:
STING1
Transmembrane protein 173.
    
 0.929
LOC101977597
Histone H2A; Belongs to the histone H2A family.
    
   0.897
LOC101965844
Histone H3; Belongs to the histone H3 family.
    
 
 0.677
THRSP
Thyroid hormone responsive.
    
  0.649
LOC101957760
Histone H2B; Belongs to the histone H2B family.
    
   0.641
LOC101957469
Histone H2B type 1-K.
    
   0.641
IRF3
Interferon regulatory factor 3.
      
 0.633
CD4
CD4 molecule.
      
 0.608
Becn1
Beclin 1.
      
 0.607
MB21D2
Mab-21 domain containing 2.
     
 0.600
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.