STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSTOP00000032359Uncharacterized protein. (556 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.882
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.801
Tardbp
Uncharacterized protein.
   
 0.696
LOC101959054
Uncharacterized protein.
   
 0.696
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.694
SRSF2
RRM domain-containing protein.
   
 0.691
TBP
TATA-box binding protein.
   
 0.674
TAF5
TATA-box binding protein associated factor 5.
    
 0.674
TAF5L
TATA-box binding protein associated factor 5 like.
    
 0.674
Srsf1
Uncharacterized protein.
   
 0.670
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.