STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNPHSyntaphilin. (488 aa)    
Predicted Functional Partners:
RAD21L1
RAD21 cohesin complex component like 1.
 
   
  0.635
RAD21
RAD21 cohesin complex component.
 
   
  0.608
SH3GL1
SH3 domain containing GRB2 like 1, endophilin A2.
      
 0.560
TMEM82
Transmembrane protein 82.
      
 0.554
SPATA3
Spermatogenesis associated 3.
      
 0.452
HAP1
Huntingtin associated protein 1.
      
 0.446
CPLX4
Complexin 4.
      
 0.418
NTAN1
N-terminal asparagine amidase.
      
 0.416
NUAK1
NUAK family kinase 1.
      
 0.410
TRAK2
Trafficking kinesin protein 2.
      
 0.410
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.