STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF507Zinc finger protein 507. (956 aa)    
Predicted Functional Partners:
INTS5
Integrator complex subunit 5.
    
 
 0.637
RNF152
Ring finger protein 152.
    
 0.625
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
    
 
 0.618
PAQR9
Progestin and adipoQ receptor family member 9.
    
 
 0.565
GET4
Guided entry of tail-anchored proteins factor 4.
      
 0.557
AGAP3
ArfGAP with GTPase domain, ankyrin repeat and PH domain 3.
      
 0.541
CHD3
Chromodomain helicase DNA binding protein 3.
    
 0.516
I3MHF1_ICTTR
Uncharacterized protein.
    
  0.501
YTHDC2
YTH domain containing 2.
   
  0.495
BARD1
BRCA1 associated RING domain 1.
    
  0.490
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.