STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A4Solute carrier family 30 member 4. (395 aa)    
Predicted Functional Partners:
SLC39A13
Solute carrier family 39 member 13.
   
 0.691
SLC30A6
Solute carrier family 30 member 6.
  
 
 
 0.682
SLC39A4
Solute carrier family 39 member 4.
   
 0.673
SLC30A9
Solute carrier family 30 member 9.
   
 
 0.600
SLC39A1
Solute carrier family 39 member 1.
    
 
 0.597
SLC39A11
Solute carrier family 39 member 11.
   
 0.581
SLC39A7
Solute carrier family 39 member 7.
   
 0.569
SLC39A9
Solute carrier family 39 member 9.
   
 
 0.567
SLC39A6
Solute carrier family 39 member 6.
   
 0.562
SLC39A5
Solute carrier family 39 member 5.
   
 0.533
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.