STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_0274RLX-related protein. (468 aa)    
Predicted Functional Partners:
CKL_0290
Plasmid transfer factor-related protein.
 
   
 0.816
CKL_0288
Conserved hypothetical protein.
 
     0.809
CKL_0295
Predicted DNA-binding protein; Belongs to the ParB family.
 
  
 0.801
CKL_0277
Conserved hypothetical protein.
 
    0.792
CKL_0284
Conserved hypothetical protein.
 
   
 0.792
CKL_0294
Conserved hypothetical protein.
 
  
 0.789
CKL_0281
Conserved hypothetical protein.
 
     0.782
CKL_0289
Conserved hypothetical protein.
 
   
 0.782
CKL_0283
Conserved hypothetical protein.
 
     0.780
CKL_1765
Conserved hypothetical protein with LexA domain; Represses a number of genes involved in the response to DNA damage (SOS response); Belongs to the helicase family. UvrD subfamily.
  
 
 0.780
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.