STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_0312Predicted spore cortex-lytic enzyme. (174 aa)    
Predicted Functional Partners:
CKL_3718
Predicted sporulation protein.
 
  
 0.802
CKL_1257
Conserved hypothetical protein.
  
  
 0.775
CKL_1592
Predicted stage V sporulation protein AC.
  
  
 0.764
CKL_1591
Predicted stage V sporulation protein AD.
  
  
 0.754
CKL_1590
Predicted stage V sporulation protein AE.
  
  
 0.658
dacA
Conserved hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
  
    0.647
CKL_0314
Conserved hypothetical protein.
  
    0.645
CKL_0315
Predicted dehydrogenase.
       0.638
CKL_1362
Hypothetical protein; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
  
 0.634
CKL_0154
Predicted stage V sporulation protein T.
  
   
 0.592
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.