STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacAConserved hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (283 aa)    
Predicted Functional Partners:
CKL_0314
Conserved hypothetical protein.
 
  
 0.976
CKL_0315
Predicted dehydrogenase.
       0.849
glmM
GlmM; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
   
 
 0.771
pgm1
Pgm1; Predicted phosphoglucomutase.
   
 
 0.683
CKL_0312
Predicted spore cortex-lytic enzyme.
  
    0.647
mutS2
MutS-related protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.628
argR
Transcriptional regulator; Regulates arginine biosynthesis genes.
   
    0.537
CKL_0995
Predicted glucose-1-phosphate nucleotidyltransferase containing an additional conserved domain.
   
 
 0.527
CKL_1778
Predicted glucose-1-phosphate nucleotidyltransferase containing an additional conserved domain.
   
 
 0.527
pgm2
Pgm2; Predicted phosphoglucomutase.
   
 
 0.527
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.