Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKL_0737 | CKL_0738 | CKL_0737 | CKL_0738 | Hypothetical protein. | RocB-related protein. | 0.553 |
CKL_0737 | bdh1 | CKL_0737 | CKL_0736 | Hypothetical protein. | Bdh1; NADPH-dependent butanol dehydrogenase. | 0.678 |
CKL_0738 | CKL_0737 | CKL_0738 | CKL_0737 | RocB-related protein. | Hypothetical protein. | 0.553 |
CKL_0738 | bdh1 | CKL_0738 | CKL_0736 | RocB-related protein. | Bdh1; NADPH-dependent butanol dehydrogenase. | 0.491 |
CKL_1074 | CKL_2138 | CKL_1074 | CKL_2138 | Acetaldehyde dehydrogenase. | Pyruvate-flavodoxin oxidoreductase. | 0.960 |
CKL_1074 | CKL_3337 | CKL_1074 | CKL_3337 | Acetaldehyde dehydrogenase. | Automatic annotation. | 0.954 |
CKL_1074 | bdh1 | CKL_1074 | CKL_0736 | Acetaldehyde dehydrogenase. | Bdh1; NADPH-dependent butanol dehydrogenase. | 0.929 |
CKL_1076 | CKL_2138 | CKL_1076 | CKL_2138 | Acetaldehyde dehydrogenase. | Pyruvate-flavodoxin oxidoreductase. | 0.617 |
CKL_1076 | CKL_3337 | CKL_1076 | CKL_3337 | Acetaldehyde dehydrogenase. | Automatic annotation. | 0.561 |
CKL_1076 | bdh1 | CKL_1076 | CKL_0736 | Acetaldehyde dehydrogenase. | Bdh1; NADPH-dependent butanol dehydrogenase. | 0.929 |
CKL_2138 | CKL_1074 | CKL_2138 | CKL_1074 | Pyruvate-flavodoxin oxidoreductase. | Acetaldehyde dehydrogenase. | 0.960 |
CKL_2138 | CKL_1076 | CKL_2138 | CKL_1076 | Pyruvate-flavodoxin oxidoreductase. | Acetaldehyde dehydrogenase. | 0.617 |
CKL_2138 | CKL_3337 | CKL_2138 | CKL_3337 | Pyruvate-flavodoxin oxidoreductase. | Automatic annotation. | 0.999 |
CKL_2138 | bdh1 | CKL_2138 | CKL_0736 | Pyruvate-flavodoxin oxidoreductase. | Bdh1; NADPH-dependent butanol dehydrogenase. | 0.454 |
CKL_2138 | sucD | CKL_2138 | CKL_3015 | Pyruvate-flavodoxin oxidoreductase. | SucD; Catalyzes the reduction of succinate semialdehyde to succinyl-CoA. The enzyme is specific for succinate semialdehyde and succinyl-CoA, and only shows low activity with palmitoyl-CoA. There is no activity with NAD(+) as cosubstrate. | 0.617 |
CKL_3337 | CKL_1074 | CKL_3337 | CKL_1074 | Automatic annotation. | Acetaldehyde dehydrogenase. | 0.954 |
CKL_3337 | CKL_1076 | CKL_3337 | CKL_1076 | Automatic annotation. | Acetaldehyde dehydrogenase. | 0.561 |
CKL_3337 | CKL_2138 | CKL_3337 | CKL_2138 | Automatic annotation. | Pyruvate-flavodoxin oxidoreductase. | 0.999 |
CKL_3337 | bdh1 | CKL_3337 | CKL_0736 | Automatic annotation. | Bdh1; NADPH-dependent butanol dehydrogenase. | 0.419 |
CKL_3337 | sucD | CKL_3337 | CKL_3015 | Automatic annotation. | SucD; Catalyzes the reduction of succinate semialdehyde to succinyl-CoA. The enzyme is specific for succinate semialdehyde and succinyl-CoA, and only shows low activity with palmitoyl-CoA. There is no activity with NAD(+) as cosubstrate. | 0.561 |
page 1 of 2