STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spsCSpsC; Predicted spore coat polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family. (391 aa)    
Predicted Functional Partners:
CKL_2097
Predicted polysaccharide biosynthesis protein.
 
  
 0.866
capD
CapD; Predicted capsular polysaccharide biosynthesis protein.
 
  
 0.842
CKL_1018
Predicted pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
 
    
0.830
CKL_3168
Conserved hypothetical protein.
 
  
 0.801
CKL_3169
Predicted polysaccharide biosynthesis protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.735
CKL_2108
Predicted polysaccharide biosynthesis protein.
 
  
 0.706
CKL_3167
Predicted UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
 
 
 0.701
CKL_1734
Predicted NRPS adenylation domain.
  
 
 0.689
CKL_2357
Predicted NRPS adenylation domain.
  
 
 0.689
CKL_2424
Predicted glycosyltransferase.
  
  
 0.670
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.