STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_1313Hypothetical protein. (293 aa)    
Predicted Functional Partners:
oppD
OppD; Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
CKL_1312
Hypothetical protein.
 
 0.998
CKL_1315
Hypothetical protein.
 
 0.998
CKL_1314
Hypothetical protein; Belongs to the ABC transporter superfamily.
  
 0.997
oppB
OppB; Oligopeptide ABC transporter, permease protein.
 
 0.995
CKL_1311
Hypothetical protein.
 0.995
oppA1
OppA1; Oligopeptide ABC transporter, extracellular solute-binding protein.
 0.991
oppA2
OppA2; Predicted oligopeptide-binding protein oppA precursor.
 
 
 0.985
oppF
OppF; Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.955
oppC
OppC; Oligopeptide ABC transporter, permease protein.
  
  
 
0.910
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.