Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKL_0781 | CKL_1108 | CKL_0781 | CKL_1108 | Transcriptional regulator. | Predicted sensor protein. | 0.958 |
CKL_0781 | CKL_1322 | CKL_0781 | CKL_1322 | Transcriptional regulator. | Hypothetical protein. | 0.511 |
CKL_1108 | CKL_0781 | CKL_1108 | CKL_0781 | Predicted sensor protein. | Transcriptional regulator. | 0.958 |
CKL_1108 | CKL_1109 | CKL_1108 | CKL_1109 | Predicted sensor protein. | Predicted signal transduction protein. | 0.992 |
CKL_1108 | CKL_1322 | CKL_1108 | CKL_1322 | Predicted sensor protein. | Hypothetical protein. | 0.647 |
CKL_1108 | CKL_1734 | CKL_1108 | CKL_1734 | Predicted sensor protein. | Predicted NRPS adenylation domain. | 0.859 |
CKL_1108 | CKL_2357 | CKL_1108 | CKL_2357 | Predicted sensor protein. | Predicted NRPS adenylation domain. | 0.859 |
CKL_1108 | crt1 | CKL_1108 | CKL_0454 | Predicted sensor protein. | Crt1; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.860 |
CKL_1108 | crt2 | CKL_1108 | CKL_2527 | Predicted sensor protein. | Crt2; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.860 |
CKL_1108 | lpdA | CKL_1108 | CKL_2268 | Predicted sensor protein. | LpdA; Dihydrolipoyl dehydrogenase (E3 component of pyruvatedehydrogenase complex). | 0.851 |
CKL_1108 | pdhC | CKL_1108 | CKL_2269 | Predicted sensor protein. | PdhC; Dihydrolipoyllysine-residue acetyltransferase (E2 component of pyruvatedehydrogenase complex). | 0.561 |
CKL_1109 | CKL_1108 | CKL_1109 | CKL_1108 | Predicted signal transduction protein. | Predicted sensor protein. | 0.992 |
CKL_1109 | CKL_1322 | CKL_1109 | CKL_1322 | Predicted signal transduction protein. | Hypothetical protein. | 0.466 |
CKL_1109 | CKL_1734 | CKL_1109 | CKL_1734 | Predicted signal transduction protein. | Predicted NRPS adenylation domain. | 0.404 |
CKL_1109 | CKL_2357 | CKL_1109 | CKL_2357 | Predicted signal transduction protein. | Predicted NRPS adenylation domain. | 0.404 |
CKL_1322 | CKL_0781 | CKL_1322 | CKL_0781 | Hypothetical protein. | Transcriptional regulator. | 0.511 |
CKL_1322 | CKL_1108 | CKL_1322 | CKL_1108 | Hypothetical protein. | Predicted sensor protein. | 0.647 |
CKL_1322 | CKL_1109 | CKL_1322 | CKL_1109 | Hypothetical protein. | Predicted signal transduction protein. | 0.466 |
CKL_1322 | CKL_1323 | CKL_1322 | CKL_1323 | Hypothetical protein. | Conserved hypothetical protein. | 0.656 |
CKL_1322 | CKL_1734 | CKL_1322 | CKL_1734 | Hypothetical protein. | Predicted NRPS adenylation domain. | 0.577 |
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