Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKL_1270 | fps | CKL_1270 | CKL_1230 | Heptaprenyl diphosphate synthase-related protein. | Fps; Predicted geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.934 |
CKL_1270 | uppS1 | CKL_1270 | CKL_1421 | Heptaprenyl diphosphate synthase-related protein. | UppS1; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.900 |
CKL_1270 | uppS2 | CKL_1270 | CKL_3336 | Heptaprenyl diphosphate synthase-related protein. | UppS2; Predicted undecaprenyl pyrophosphate synthase. | 0.900 |
CKL_1422 | dxr | CKL_1422 | CKL_1423 | Predicted phosphatidate cytidylyltransferase; Belongs to the CDS family. | Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.877 |
CKL_1422 | frr | CKL_1422 | CKL_1420 | Predicted phosphatidate cytidylyltransferase; Belongs to the CDS family. | Frr; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.684 |
CKL_1422 | pyrH | CKL_1422 | CKL_1419 | Predicted phosphatidate cytidylyltransferase; Belongs to the CDS family. | PyrH; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.765 |
CKL_1422 | uppS1 | CKL_1422 | CKL_1421 | Predicted phosphatidate cytidylyltransferase; Belongs to the CDS family. | UppS1; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.920 |
CKL_1422 | uppS2 | CKL_1422 | CKL_3336 | Predicted phosphatidate cytidylyltransferase; Belongs to the CDS family. | UppS2; Predicted undecaprenyl pyrophosphate synthase. | 0.812 |
CKL_3403 | uppP | CKL_3403 | CKL_2312 | Hypothetical protein. | UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.919 |
CKL_3403 | uppP-2 | CKL_3403 | CKL_2698 | Hypothetical protein. | Predicted undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.919 |
CKL_3403 | uppS1 | CKL_3403 | CKL_1421 | Hypothetical protein. | UppS1; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.913 |
CKL_3403 | uppS2 | CKL_3403 | CKL_3336 | Hypothetical protein. | UppS2; Predicted undecaprenyl pyrophosphate synthase. | 0.925 |
dxr | CKL_1422 | CKL_1423 | CKL_1422 | Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Predicted phosphatidate cytidylyltransferase; Belongs to the CDS family. | 0.877 |
dxr | fps | CKL_1423 | CKL_1230 | Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Fps; Predicted geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.525 |
dxr | frr | CKL_1423 | CKL_1420 | Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Frr; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.705 |
dxr | pyrH | CKL_1423 | CKL_1419 | Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | PyrH; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.651 |
dxr | uppS1 | CKL_1423 | CKL_1421 | Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | UppS1; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.885 |
dxr | uppS2 | CKL_1423 | CKL_3336 | Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | UppS2; Predicted undecaprenyl pyrophosphate synthase. | 0.789 |
fps | CKL_1270 | CKL_1230 | CKL_1270 | Fps; Predicted geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Heptaprenyl diphosphate synthase-related protein. | 0.934 |
fps | dxr | CKL_1230 | CKL_1423 | Fps; Predicted geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.525 |
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