STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_1727Transposase. (241 aa)    
Predicted Functional Partners:
CKL_2870
Transposase-related protein.
 
    0.765
CKL_1728
Transposase.
 
    0.738
CKL_0495
Hypothetical protein.
 
    0.548
CKL_1715
Transposase.
 
    0.548
CKL_2523
Hypothetical protein.
 
    0.548
CKL_2539
Hypothetical protein.
 
    0.548
CKL_2676
Hypothetical protein.
 
    0.548
CKL_2749
Hypothetical protein.
 
    0.548
CKL_2936
Hypothetical protein.
 
    0.548
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.