Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKL_1527 | CKL_1731 | CKL_1527 | CKL_1731 | Predicted polyketide synthase. | Predicted polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.863 |
CKL_1527 | CKL_1732 | CKL_1527 | CKL_1732 | Predicted polyketide synthase. | Predicted PKS acyltransferase domain. | 0.993 |
CKL_1527 | CKL_1734 | CKL_1527 | CKL_1734 | Predicted polyketide synthase. | Predicted NRPS adenylation domain. | 0.999 |
CKL_1527 | CKL_2324 | CKL_1527 | CKL_2324 | Predicted polyketide synthase. | Predicted 3-oxoacyl-[acyl-carrier-protein] synthase. | 0.758 |
CKL_1527 | CKL_2357 | CKL_1527 | CKL_2357 | Predicted polyketide synthase. | Predicted NRPS adenylation domain. | 0.999 |
CKL_1527 | accD | CKL_1527 | CKL_0111 | Predicted polyketide synthase. | AccD; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.693 |
CKL_1527 | fabF | CKL_1527 | CKL_0107 | Predicted polyketide synthase. | FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.984 |
CKL_1527 | fabG1 | CKL_1527 | CKL_0106 | Predicted polyketide synthase. | FabG1; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.503 |
CKL_1527 | fabH1 | CKL_1527 | CKL_0102 | Predicted polyketide synthase. | FabH1; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.758 |
CKL_1527 | fabH2 | CKL_1527 | CKL_3513 | Predicted polyketide synthase. | FabH2; Predicted 3-oxoacyl-synthase. | 0.758 |
CKL_1731 | CKL_1527 | CKL_1731 | CKL_1527 | Predicted polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Predicted polyketide synthase. | 0.863 |
CKL_1731 | CKL_1732 | CKL_1731 | CKL_1732 | Predicted polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Predicted PKS acyltransferase domain. | 0.985 |
CKL_1731 | CKL_1734 | CKL_1731 | CKL_1734 | Predicted polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Predicted NRPS adenylation domain. | 0.998 |
CKL_1731 | CKL_2357 | CKL_1731 | CKL_2357 | Predicted polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Predicted NRPS adenylation domain. | 0.995 |
CKL_1732 | CKL_1527 | CKL_1732 | CKL_1527 | Predicted PKS acyltransferase domain. | Predicted polyketide synthase. | 0.993 |
CKL_1732 | CKL_1731 | CKL_1732 | CKL_1731 | Predicted PKS acyltransferase domain. | Predicted polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.985 |
CKL_1732 | CKL_1734 | CKL_1732 | CKL_1734 | Predicted PKS acyltransferase domain. | Predicted NRPS adenylation domain. | 0.996 |
CKL_1732 | CKL_2324 | CKL_1732 | CKL_2324 | Predicted PKS acyltransferase domain. | Predicted 3-oxoacyl-[acyl-carrier-protein] synthase. | 0.969 |
CKL_1732 | CKL_2357 | CKL_1732 | CKL_2357 | Predicted PKS acyltransferase domain. | Predicted NRPS adenylation domain. | 0.991 |
CKL_1732 | accD | CKL_1732 | CKL_0111 | Predicted PKS acyltransferase domain. | AccD; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.973 |
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