STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_1790Predicted phosphatase. (216 aa)    
Predicted Functional Partners:
CKL_1710
Conserved hypothetical protein.
  
  
  0.947
CKL_1782
Predicted FAD/FMN-containing dehydrogenase.
    
 0.910
CKL_3515
Predicted FAD/FMN-containing dehydrogenase.
    
 0.910
gyaR
GyaR; Predicted glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.903
CKL_2138
Pyruvate-flavodoxin oxidoreductase.
     
 0.683
CKL_3337
Automatic annotation.
     
 0.601
ribAB
RibAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.568
purL
PurL; Predicted phosphoribosylformylglycinamidine synthase.
  
  
 0.531
flgD
FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.478
CKL_1377
Pentose phosphate epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.437
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.