node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CKL_2329 | CKL_2537 | CKL_2329 | CKL_2537 | Predicted ABC transporter with duplicated ATPase domain. | Predicted transport protein. | 0.913 |
CKL_2329 | CKL_2618 | CKL_2329 | CKL_2618 | Predicted ABC transporter with duplicated ATPase domain. | Predicted ABC transporter, ATPase component. | 0.912 |
CKL_2329 | rplD | CKL_2329 | CKL_0225 | Predicted ABC transporter with duplicated ATPase domain. | RplD; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.678 |
CKL_2329 | rplM | CKL_2329 | CKL_0258 | Predicted ABC transporter with duplicated ATPase domain. | RplM; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.664 |
CKL_2329 | rplU | CKL_2329 | CKL_0879 | Predicted ABC transporter with duplicated ATPase domain. | RplU; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.673 |
CKL_2329 | rpsC | CKL_2329 | CKL_0230 | Predicted ABC transporter with duplicated ATPase domain. | RpsC; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.661 |
CKL_2329 | rpsE | CKL_2329 | CKL_0241 | Predicted ABC transporter with duplicated ATPase domain. | RpsE; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.670 |
CKL_2329 | rpsG | CKL_2329 | CKL_0220 | Predicted ABC transporter with duplicated ATPase domain. | RpsG; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.657 |
CKL_2329 | rpsI | CKL_2329 | CKL_0259 | Predicted ABC transporter with duplicated ATPase domain. | RpsI; 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.681 |
CKL_2329 | rpsO | CKL_2329 | CKL_1436 | Predicted ABC transporter with duplicated ATPase domain. | RpsO; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.663 |
CKL_2537 | CKL_2329 | CKL_2537 | CKL_2329 | Predicted transport protein. | Predicted ABC transporter with duplicated ATPase domain. | 0.913 |
CKL_2537 | CKL_2618 | CKL_2537 | CKL_2618 | Predicted transport protein. | Predicted ABC transporter, ATPase component. | 0.900 |
CKL_2537 | rplD | CKL_2537 | CKL_0225 | Predicted transport protein. | RplD; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.678 |
CKL_2537 | rplM | CKL_2537 | CKL_0258 | Predicted transport protein. | RplM; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.664 |
CKL_2537 | rplU | CKL_2537 | CKL_0879 | Predicted transport protein. | RplU; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.673 |
CKL_2537 | rpsC | CKL_2537 | CKL_0230 | Predicted transport protein. | RpsC; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.661 |
CKL_2537 | rpsE | CKL_2537 | CKL_0241 | Predicted transport protein. | RpsE; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.626 |
CKL_2537 | rpsG | CKL_2537 | CKL_0220 | Predicted transport protein. | RpsG; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.657 |
CKL_2537 | rpsI | CKL_2537 | CKL_0259 | Predicted transport protein. | RpsI; 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.631 |
CKL_2537 | rpsO | CKL_2537 | CKL_1436 | Predicted transport protein. | RpsO; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.663 |