STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_2507Predicted ABC transporter, ATP-binding protein. (266 aa)    
Predicted Functional Partners:
CKL_2508
Predicted ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.992
CKL_2506
Predicted ABC transporter, extracellular solute binding protein.
 
 
 0.975
CKL_2505
Predicted ABC transporter, extracellular solute binding protein.
 
 
 0.969
CKL_1706
Predicted ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.958
CKL_3673
Predicted transporter protein.
 
 
 0.891
CKL_1741
Predicted transporter protein.
 
 
 0.878
CKL_1708
Predicted ABC transporter, extracellular binding protein.
 
 
 0.877
CKL_2509
Predicted iron-molybdenum cofactor biosynthesis protein.
       0.688
CKL_2510
Nitrogenase associated protein.
       0.688
CKL_3054
Predicted transport protein.
  
     0.480
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.