Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CKL_2624 | CKL_2625 | Predicted amidase. | Hypothetical protein. | 0.800 |
CKL_2624 | CKL_2627 | Predicted amidase. | Conserved hypothetical protein. | 0.599 |
CKL_2624 | CKL_2628 | Predicted amidase. | Predicted phage structural protein. | 0.685 |
CKL_2624 | CKL_2629 | Predicted amidase. | Conserved hypothetical protein. | 0.722 |
CKL_2624 | CKL_2630 | Predicted amidase. | Phage-related protein. | 0.704 |
CKL_2624 | CKL_2631 | Predicted amidase. | Phage-related protein. | 0.894 |
CKL_2624 | CKL_2633 | Predicted amidase. | Conserved hypothetical protein. | 0.823 |
CKL_2624 | CKL_2634 | Predicted amidase. | Phage-related protein. | 0.818 |
CKL_2624 | CKL_2635 | Predicted amidase. | Conserved hypothetical protein. | 0.822 |
CKL_2624 | CKL_2639 | Predicted amidase. | Phage-related protein. | 0.814 |
CKL_2625 | CKL_2624 | Hypothetical protein. | Predicted amidase. | 0.800 |
CKL_2625 | CKL_2627 | Hypothetical protein. | Conserved hypothetical protein. | 0.628 |
CKL_2625 | CKL_2628 | Hypothetical protein. | Predicted phage structural protein. | 0.605 |
CKL_2625 | CKL_2629 | Hypothetical protein. | Conserved hypothetical protein. | 0.590 |
CKL_2625 | CKL_2630 | Hypothetical protein. | Phage-related protein. | 0.590 |
CKL_2625 | CKL_2631 | Hypothetical protein. | Phage-related protein. | 0.564 |
CKL_2627 | CKL_2624 | Conserved hypothetical protein. | Predicted amidase. | 0.599 |
CKL_2627 | CKL_2625 | Conserved hypothetical protein. | Hypothetical protein. | 0.628 |
CKL_2627 | CKL_2628 | Conserved hypothetical protein. | Predicted phage structural protein. | 0.808 |
CKL_2627 | CKL_2629 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.817 |
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