STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livHLivH; Predicted branched-chain amino acid transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family. (291 aa)    
Predicted Functional Partners:
livG
LivG; Predicted branched-chain amino acid transport ATP-binding protein.
 
 0.999
livM
LivM; Predicted branched-chain amino acid transport system, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
livK
LivK; Predicted branched-chain amino binding protein precursor.
 
 
 0.998
livF
LivF; Predicted branched-chain amino acid transport ATP-binding protein.
 
 0.998
CKL_0619
Predicted ABC transporter, ATPase component.
  
  
 0.777
CKL_3068
Conserved hypothetical protein.
  
  
 0.698
CKL_3094
Conserved hypothetical protein.
  
  
 0.698
guaB
GuaB; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
    0.475
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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