STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_3002Predicted glycyl radical enzyme. (789 aa)    
Predicted Functional Partners:
CKL_3001
Predicted glycyl radical enzyme activator.
 
  
 0.949
CKL_0322
Predicted glycyl radical enzyme activator.
 
  
 0.897
act
Act; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
 
  
 0.861
CKL_2138
Pyruvate-flavodoxin oxidoreductase.
    
 0.820
pta
Pta; Phosphotransacetylase.
   
 
 0.665
pyk
Pyk; Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.659
CKL_3337
Automatic annotation.
     
 0.637
CKL_1074
Acetaldehyde dehydrogenase.
  
 
 0.568
CKL_0044
Predicted citrate synthase; Belongs to the citrate synthase family.
     
 0.549
porC
PorC; Pyruvate:ferredoxin oxidoreductase.
     
 0.529
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.