STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_3022Predicted acyl dehydratase. (139 aa)    
Predicted Functional Partners:
bcd
Bcd; butyryl-CoA dehydrogenase.
 0.984
crt1
Crt1; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.952
crt2
Crt2; 3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.952
abfD
AbfD; 4-hydroxybutyryl-CoA dehydratase.
    
  0.932
hbd1
Hbd1; 3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.799
CKL_1734
Predicted NRPS adenylation domain.
   
 
 0.729
CKL_2357
Predicted NRPS adenylation domain.
   
 
 0.729
hbd2
Hbd2; Predicted 3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.725
CKL_1527
Predicted polyketide synthase.
  
 0.691
CKL_3023
Conserved hypothetical protein.
     
 0.661
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.