Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CKL_3203Histidine kinase-related protein. (745 aa)    
Predicted Functional Partners:
CKL_2127
Hypothetical protein.
 
 
 0.904
CKL_1108
Predicted sensor protein.
 
 
 
0.835
CKL_2349
Predicted sensory transduction histidine kinase.
 
 
 
 0.765
CKL_0965
Two component sensor kinase.
 
 
 
 0.740
sigL
SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.735
CKL_2438
Predicted sensory transduction histidine kinase.
  
 
 
 0.717
CKL_1681
Predicted two component sensor kinase.
  
   
 0.714
CKL_1682
Transcriptional regulator.
  
 
 
 0.703
CKL_2319
Predicted sensor kinase.
 
 
 
 0.698
CKL_3522
Predicted transcriptional regulator.
  
 
 
 0.682
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.