STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_3208Small acid-soluble spore protein. (89 aa)    
Predicted Functional Partners:
ssb2
Ssb2; Predicted single stranded DNA binding protein.
  
     0.725
CKL_3727
Conserved hypothetical protein.
  
     0.710
cotS2
CotS2; Predicted spore coat protein.
  
     0.707
CKL_3197
Conserved hypothetical protein.
  
    0.695
CKL_3737
Predicted spore coat protein.
  
     0.677
CKL_3209
Predicted S-adenosylmethionine-dependent methyltransferase.
 
     0.675
CKL_0160
Conserved hypothetical protein.
  
     0.674
CKL_3740
Predicted spore coat protein.
  
     0.671
cotS1
CotS1; Predicted spore coat protein.
  
     0.668
CKL_3907
Hypothetical protein.
  
     0.650
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.