STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_3216Conserved hypothetical protein. (295 aa)    
Predicted Functional Partners:
CKL_3761
Conserved hypothetical protein.
  
     0.700
CKL_3217
Conserved hypothetical protein.
       0.687
CKL_1734
Predicted NRPS adenylation domain.
  
  
 0.578
CKL_2357
Predicted NRPS adenylation domain.
  
  
 0.578
CKL_2138
Pyruvate-flavodoxin oxidoreductase.
   
   0.563
CKL_3907
Hypothetical protein.
  
     0.554
CKL_3582
Conserved hypothetical protein.
  
     0.541
murA1
MurA1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.525
CKL_1511
Predicted nonribosomal peptide synthetase.
  
    0.518
CKL_2354
Predicted nonribosomal peptide synthetase.
  
    0.515
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.