STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKL_3657Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
gltB
GltB; Glutamate synthase, large subunit.
  
  
 0.585
CKL_3655
Permease.
  
    0.577
CKL_3656
Permease.
  
    0.577
CKL_0590
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.503
CKL_0432
CoA-disulfide reductase-related protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.462
CKL_1734
Predicted NRPS adenylation domain.
     
 0.409
CKL_2357
Predicted NRPS adenylation domain.
     
 0.409
Your Current Organism:
Clostridium kluyveri
NCBI taxonomy Id: 431943
Other names: C. kluyveri DSM 555, Clostridium kluyveri DSM 555, Clostridium kluyveri str. DSM 555, Clostridium kluyveri strain DSM 555
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.