STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1205_025370Vacuolar sorting protein 9 (Vps9) domain-containing protein. (1326 aa)    
Predicted Functional Partners:
TGVEG_207460B
Rab5B protein.
    
 0.938
BN1205_070135
Ras family domain-containing protein.
    
 0.938
BN1205_109320
Rab 5.
    
 0.938
BN1205_056190
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.907
BN1205_097090
Eukaryotic translation initiation factor 2B,putative; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.839
BN1205_083510
Ubiquitin / ribosomal protein CEP52 fusion protein, putative.
    
 0.798
TGVEG_271285
Leucine rich repeat-containing protein.
   
 0.765
BN1205_047060
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.745
BN1205_102760
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.741
BN1205_083810
Serine/threonine-protein phosphatase.
    
 0.740
Your Current Organism:
Toxoplasma gondii
NCBI taxonomy Id: 432359
Other names: T. gondii VEG, Toxoplasma gondii VEG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.